Welcome to Answer’s documentation!¶
ANSWER can be used by clinical geneticists or pathologists to identify clinically actionable variants from next-generation sequencing data for the purposes of recommending personalized treatment options.
Functions¶
The platform allows users to * examine variant quality using the integrated genome viewer (IGV) * add their own annotations that can be used in future cases * filter variants based on their gene location, chromosomal feature or quality metrics * generate a clinical report in PDF format or HL7 format that can be loaded into the providers electronic health record (EHR)
Visualization¶
Integrated IGV
Gene Expression FPKM Plots
Mutational Signatures Plots
Copy Number Alteration Coverage and B-Allele Frequency Plots